University of California San Francisco

Alexis Combes, PhD

alexis.combes
Alexis Combes, PhD

Assistant Professor, Pathology
School of Medicine

Address

513 Parnassus Avenue MSB, #859
San Francisco, CA 94143
United States

Email: [email protected]

ORCID: 0000-0002-9110-6542

Collaboration Interests

I am interested in:

  • academic collaboration

Publications

MOST RECENT PUBLICATIONS FROM A TOTAL OF 10
  1. Differential assembly of mouse and human tumor microenvironments.
    Courau T, Jaszczak RG, Samad B, Flynn E, Chew NW, Reeder GC, Tsui J, Teklu S, Pass LF, Edwards AW, Naser M, Ray A, Wismer H, Bunis D, Lupin-Jimenez L, Gavil NV, Masopust D, Graham JP, Skelly DA, Vesco X, Liu ET, Fragiadakis GK, Combes AJ, Krummel MF| | PubMed
  2. Clinical cure of chronic hepatitis B is associated with priming and perpetuation of hepatic CD4+ T cell responses.
    Jespersen JM, Avanesyan L, Publicover J, Carey ND, Patel RK, Edwards AW, Stenske S, Shin J, Li J, Simone M, Chew NW, Wong N, Trilok S, Erickson A, Rao A, Loo CP, Stec M, Anderson M, Cloherty G, Sarkar M, Nishimura SL, Combes AJ, Wakil AE, Segal MR, Fragiadakis GK, Cooper SL, Baron JL| | PubMed
  3. Single-cell spatiotemporal dissection of the human maternal-fetal interface.
    Wang C, Zhou Y, Wang Y, Guha TK, Luo Z, Mustafaraj A, McIntyre TI, Schwab ME, Davidson BR, Reeder GC, Wong RJ, England SK, Gonzalez JM, Blelloch R, Combes AJ, Giudice LC, Erlebacher A, MacKenzie TC, Stevenson DK, Shaw GM, Snyder MP, Sun X, Winn VD, Fisher SJ, Li J| | PubMed
  4. Temporal AI model predicts drivers of cell state trajectories across human aging.
    Ortega JG, Nadadur RD, Kunitomi A, Kothen-Hill S, Wagner JUG, Kurtoglu SD, Kim B, Reid MM, Lu T, Washizu K, Zanders L, Chen H, Zhang Y, Ancheta S, Lichtarge S, Johnson WA, Thompson C, Phan DM, Combes AJ, Yang AC, Tadimeti N, Dimmeler S, Yamanaka S, Alexanian M, Theodoris CV| | PubMed
  5. Tumor Heterogeneity Induces Pro- and Anti-metastatic Myeloid Cell Phenotypes in Breast Cancer Lung Metastasis.
    Superville DA, Chrenková E, Zheng Y, Combes AJ, Barozzi I, Werb Z, Rendeiro AF, McGinnis CS, Goga A, Winkler J| | PubMed
  6. Local gene editing of fibroblasts in tumors reveals a new cancer-associated fibroblast state.
    Kuhn NF, Zaleta-Linares I, Hu KH, Courau T, Davidson B, Tam T, Chu CW, Kinet MJ, Rosenblum MD, Combes AJ, Nyberg WA, Eyquem J, Krummel MF| | PubMed
  7. Immune-microbiome coordination defines interferon setpoints in healthy humans.
    Babdor J, Patel RK, Davidson B, Koser K, Noecker C, Rahim MK, Bisanz JE, Tenvooren I, Marquez D, Calvo M, Johri V, McCarthy EE, Shaheed A, Ekstrand C, Weakley AM, Yu FB, Krip K, Shaikh KA, Amatullah H, Fiehn O, Turnbaugh PJ, Combes AJ, Fragiadakis GK, Spitzer MH| | PubMed
  8. CD38 expression by neonatal human naive CD4+ T cells shapes their distinct metabolic and tolerogenic properties.
    Dwyer LR, DeRogatis AM, Clancy S, Gouirand V, Chien C, Rogers EE, Oltman SP, Jelliffe-Pawlowski LL, van den Broek T, van Wijk F, Lynch SV, Rutishauser RL, Wagner A, Combes AJ, Scharschmidt TC| | PubMed
  9. Commensal-myeloid crosstalk in neonatal skin regulates interleukin-1 signaling and cutaneous type 17 inflammation.
    Dhariwala MO, Carale RO, DeRogatis AM, Rodriguez-Valbuena H, Okoro JN, Ekstrand CA, Weckel A, Tran VM, Habrylo I, Barrere-Cain R, Ojewumi OT, Tammen AE, Tsui J, Shaikh S, Yellamilli S, Aladhami AK, Schwartz R, Leech JM, Merana GR, Hiam-Galvez KJ, Mack M, Halkias J, Gardner JM, Rutishauser RL, Fragiadakis GK, Spitzer MH, Combes AJ, Scharschmidt TC| | PubMed
  10. Spatial Transcriptomics Reveals CXCL12+ Fibroblasts as Central Immune Organizers through CXCR4 Signaling in Abdominal Aortic Aneurysm.
    Levy-Lambert D, Ramirez JL, Shaikh S, De Jeronimo Diaz C, Huang AG, Combes A, Fragiadakis GK, Fidler TP, Oskowitz AZ| | PubMed